Install¶
The bfio
package can be installed with a variety of options designed in
consideration of containerization.
Base Package¶
The base package can only read/write tiled, OME TIFF images. It can be installed using:
pip install bfio
Java and Bioformats¶
To use Bioformats, it is necessary to install Java 8 or later. Once Java is
installed, bfio
can be installed with support for Java using:
pip install bfio[‘jpype’]
Zarr¶
To use the zarr backend, you need to have Zarr already installed, or you can install it when installing bfio using:
pip install bfio[‘jpype’]